addr_top.gif (9828 bytes)
addr_bottom2.gif (898 bytes)

Additional Water for the San Joaquin River Agreement,
2000 – 2010 Supplemental EIS/EIR

5. GROUNDWATER RESOURCES

Index

5.1 Affected Environment

This section of the Supplemental EIS/EIR (SEIS/EIR) is a condensed summary of Section 3.3 and Appendix B of the Meeting Flow Objectives for the San Joaquin River Agreement, 1999-2010, Final Environmental Impact Statement/Environmental Impact Report dated January 28, 1999 (Final EIS/EIR, Reclamation 1999). The Final EIS/EIR included a detailed overview of the regional groundwater resources within the San Joaquin Groundwater Basin and area-specific information on the groundwater basins underlying the service areas of the San Joaquin River Group Authority members willing to provide up to 47,000 acre-feet of additional water that may be needed to achieve full Vernalis Adaptive Management Plan (VAMP) Target Flows during double-step years. The additional water would supplement VAMP test flows, which otherwise may not be achieved during certain years due to the San Joaquin River Agreement cap of 110,000 acre-feet.

5.1.1 Introduction

This summary includes information on historical perspective and recent groundwater conditions for the San Joaquin River Region. It covers the following basins that include the service areas that would be providing the additional water:

  • Turlock Groundwater Basin
  • Modesto Groundwater Basin
  • Merced Groundwater Basin

Detailed characteristics of each basin are included in the Final EIS/EIR as follows: hydrogeology (Section 3.3.4.1), groundwater storage and production (Section 3.3.4.2), groundwater levels (Section 3.3.4.3), groundwater quality (Section 3.3.4.4), land subsidence (Section 3.3.4.5), agricultural subsurface drainage (Section 3.3.4.6), and seepage-induced waterlogging of farmlands (Section 3.3.4.7). In addition, Appendix B of the Final EIS/EIR includes detailed information on groundwater conditions.

5.1.2 Historical Perspective and Recent Conditions

Groundwater resources of the San Joaquin Valley are described in the Final EIS/EIR with regard to regional hydrogeology, groundwater storage and production, groundwater levels, and groundwater quality. The Final EIS/EIR presentation of groundwater quality covers those constituents of concern that affect agricultural productivity and others that are noted to be in high concentrations and known to affect human health and wildlife, including total dissolved solids (TDS), boron, nitrates, arsenic, selenium, and dibromochloropropane.

In addition, three other issues are historically related to groundwater conditions:

  • Agricultural subsurface drainage has been affected by the presence of perched shallow groundwater conditions in parts of the San Joaquin Valley;
  • Seepage-induced waterlogging of farmlands has occurred due to the movement of water from streams into adjacent shallow groundwater aquifers;
  • Land subsidence may be caused by one or a combination of the following mechanisms: compaction of aquifer sediments from groundwater overdrafts with subsequent lowered hydraulic head in the aquifer; compaction of sediments in petroleum reservoir rocks from oil and gas exploration and extraction; hydrocompaction (the compaction of moisture-deficient sediments following the first application of water); compaction of peat soils following land drainage; and tectonic subsidence (Bertoldi et al. 1991).

Historically, the greatest occurrence of land subsidence in the San Joaquin Valley has resulted from groundwater overdrafts and lowered hydraulic head, and was the only type of land subsidence discussed in the Final EIS/EIR.

5.1.3 Overview of the Central Valley Regional Aquifer System

The Central Valley regional aquifer system is a 400-mile-long, northwest-trending asymmetric trough averaging 50 miles in width. The significant water-producing geologic units are the unconsolidated to semiconsolidated nonmarine sediments that range from the Oligocene and Miocene ages (13 million to 25 million years old) too recent. The west side of the aquifer system is bounded by pre-Tertiary and Tertiary semiconsolidated to consolidated marine sedimentary rocks of the Coast Ranges. These faulted and folded sediments extend eastward beneath most of the Central Valley and any water contained in the sediments is usually saline. The east side of the valley is underlain by pre-Tertiary igneous and metamorphic rocks of the Sierra Nevada. Only small quantities of water are extracted from the joints and cracks of these basement rocks.

5.1.4 Groundwater Resources of the San Joaquin River Region

The southern two-thirds of the Central Valley regional aquifer system extends from just south of the Delta to just south of Bakersfield, covering over 13,500 square miles, and is referred to as the San Joaquin Valley Basin (DWR 1975). The Department of Water Resources (DWR) further divides this basin into subbasins. Subbasins in the northern half of the San Joaquin Valley Basin, lying within the San Joaquin River Region, include the Tracy, Eastern San Joaquin County, Modesto, Turlock, Merced, Chowchilla, Madera, and Delta-Mendota subbasins (DWR 1994).

5.1.5 Summary of Groundwater Conditions

Each of the San Joaquin River Region basins that include service areas that would be providing the additional water are summarized in Table 5-1. The areas include:

  • Turlock Groundwater Basin
  • Modesto Groundwater Basin
  • Merced Groundwater Basin

A detailed description of the groundwater resources in each of the basins is contained in Appendix B of the Final EIS/EIR.

Table 5-1
Summary of Groundwater Conditions in the San Joaquin River Region

 

Groundwater Basin or Service Area

Groundwater Conditions

Turlock Groundwater Basin

Modesto Basin

Merced Groundwater Basin

Elevation/Levels Depth to groundwater ranges from 6 to over 100 feet bgs

Water table declined approximately 5 feet

Depth to groundwater ranges from less than 5 feet to over 100 feet bgs

Water table declined 15 feet for period from 1970-1990

Depth to groundwater ranges from less than 1 foot to over 100 feet bgs

Water table declined up to 40 feet for period from 1980-1992

Water Quality Water hardness moderate to very hard Generally acceptable Numerous constituents detected
  • TDS
High TDS in wells deeper than 350 feet Relatively low High TDS in wells deeper than 350 feet
  • Nitrates
Localized and some levels above MCL Localized and some levels above MCL Below current MCL
  • Arsenic
Below current MCL Below current MCL Below current MCL
  • Iron and Manganese
Elevated naturally occurring concentrations Elevated naturally occurring concentrations Elevated naturally occurring concentrations
  • Radionuclides
High naturally occurring uranium High naturally occurring uranium No data available
  • Pesticides
Localized and some levels above MCL Localized and some levels above MCL Levels detected at or below MCL
  • Trace Organics/ Organics
Isolated occurrences principally the result of leaking USTs � none in public water supply Isolated occurrences principally the result of leaking USTs � some in public water supply Localized and some levels above MCLs
Subsidence Not a problem Not a problem Not a problem
Agricultural Subsurface Drainage Drainage pumping Drainage pumping Drainage pumping

Notes:

bgs = below ground surface

MCL = maximum contaminant level

TDS = total dissolved solids

UST = underground storage tank

5.1.5.1 Turlock Groundwater Basin

Water level data shows that water levels have declined between 1971 and 1991 (TID 1997) in response to pumping that was taking place outside the Turlock Irrigation District (TID). The largest water level declines have occurred within the eastern part of the basin, where declines are as much as 90 feet. Water levels have declined approximately 5 feet throughout the western part of the basin.

These declines are largely the result of pumping from outside of the TID resulting in annual overdrafting in the Turlock Groundwater Basin at an annual estimated rate of 70,000 to 85,000 acre-feet (TID 1997). DWR estimates that the typical groundwater production rate in the basin is 452,000 acre-feet per year (DWR 1998). On a local level, groundwater extraction rates vary throughout the basin (based on factors such as location of municipalities, depth to groundwater, and crop water needs).

Water levels will probably continue to decline within the TID service area as a result of the overdrafting. The rate of groundwater decline will vary throughout the area depending on conditions such as groundwater extraction rates, underflow to groundwater depressions located outside TID, and recharge from sources including irrigation seepage, precipitation, groundwater inflow, and artificial recharge.

5.1.5.2 Modesto Groundwater Basin

Long-term water-level monitoring conducted by DWR indicates that the Modesto Groundwater Basin has experienced groundwater declines of 15.3 feet in the period from 1970 to 1990 (HCI 1992). This decline represents depletion of storage of 404,000 acre-feet. The average annual water budget for the period from 1952 to 1991 indicates the average annual overdraft in the basin was 2,300 acre-feet per year (MID 1996). The overdraft was indicated by water level declines of approximately 0.5 foot per year (HCI 1993).

The average annual overdraft in the Modesto Groundwater Basin is estimated at 15,000 acre-feet (MID 1996). DWR estimates that the typical groundwater production rate in the basin is 229,000 acre-feet per year (DWR 1998). On a local level, groundwater extraction rates vary throughout the basin (based on factors such as location of municipalities, depth to groundwater, and crop water needs).

The rate of groundwater decline within the Modesto Irrigation District (MID) service area will vary throughout the area depending on conditions such as groundwater extraction rates, underflow to groundwater depressions located outside MID, and recharge from sources including irrigation seepage, precipitation, groundwater inflow and artificial recharge.

5.1.5.3 Merced Groundwater Basin

Long-term water-level monitoring indicates that the Merced Groundwater Basin has experienced groundwater declines of 40 feet in the period from 1960 to 1992. This decline represents depletion of storage of 404,000 acre-feet.

The average annual overdraft in the Merced Groundwater Basin is estimated at 20,000 acre-feet (Merced ID 1997). DWR estimates that the typical groundwater production rate in the basin is 555,000 acre-feet per year (DWR 1998). Based on factors such as location of municipalities, depth to groundwater, and crop water needs, on a local level, groundwater extraction rates vary throughout the basin.

Projected agricultural and municipal groundwater usage for the Merced Irrigation District (Merced ID) service area is approximately 638,000 acre-feet per year (Merced ID 1997). Of this volume, Merced ID pumps approximately 10,000 acre-feet per year. Total agricultural groundwater demand in the basin is projected to decrease by 12 percent over the next 40 years, from 601,800 acre-feet per year in 1996 to 529,584 acre-feet per year in 2036 (Merced ID 1997). Total groundwater demand for municipal uses in the basin is projected to increase by approximately 33 percent by 2030, from approximately 40,000 acre-feet per year in 1996 to 121,000 acre-feet per year in 2036 (Merced ID 1997). No estimates were given for the increase in demand for industrial uses. Given the projected usage of groundwater, overdrafting of the Merced Groundwater Basin would continue to increase.

Water levels will probably continue to decline within the Merced ID service area as a result of the overdrafting. The rate of groundwater decline will vary throughout the area depending on conditions such as groundwater extraction rates, underflow to groundwater depressions located outside Merced ID, and recharge from sources including irrigation seepage, precipitation, groundwater inflow, and artificial recharge.

In the Final EIS/EIR, Appendix G discussed the California Environmental Quality Act requirement of a mitigation monitoring or reporting program for any significant impacts identified in the Final EIS/EIR. To mitigate the potentially significant impacts to groundwater conditions, the Merced ID has implemented a conjunctive use project that will work towards the goals of stabilizing the groundwater at 1992 levels. Chapter 21 discusses the current progress of this project in more detail.

5.2 ENVIRONMENTAL CONSEQUENCES AND MITIGATION MEASURES

This section describes changes to groundwater conditions associated with the Proposed Project (i.e., release of up to 47,000 acre-feet of additional flow from carry over storage to achieve the full VAMP test flows), as compared to the No Action Alternative (i.e., the existing conditions with VAMP test flows).

5.2.1 Key Impact Issues and Evaluation Criteria

With respect to groundwater, the primary issue is the extent to which the additional water releases from the Project reservoirs (up to 47,000 acre-feet) would affect groundwater storage in the Project Area.

As described in Section 2.1, the No Action Alternative includes the VAMP flows up to 110,000 acre-feet. The following discussions will only deal with the environmental consequences of additional flows of up to 47,000 acre-feet. No change in groundwater pumping is anticipated as a consequence of the Proposed Project/Action.

5.2.2 Environmental Impacts and Mitigation

The potential impact of the Proposed Project/Action manifests as reduced storage in New Don Pedro and/or New Exchequer Reservoirs until such time that the storage is recovered through reductions in releases from the reservoirs that would otherwise be in excess of instream flow requirements. The Proposed Project/Action is not anticipated to affect the diversion or delivery of water to any water user within the affected basins; therefore, no change to the timing or occurrence of return flows is anticipated.

In the Supplemental Hydrologic Analysis (Appendix A), the model results indicate that Proposed Project releases would only occur during approximately 10 percent of the years during the modeled period of 1922 through 1992 (71 years). The modeled supplemental flows would range from 2,000 to 46,000 acre-feet. During the few years when supplemental water would be required, a direct release to the lower Tuolumne River (i.e., MID and TID water from New Don Pedro Reservoir) or the lower Merced River (i.e., Merced ID water from Lake McClure could occur. As a result, the river stage downstream of the release would be raised with the corresponding potential for groundwater recharge where the river stage is higher than the adjacent groundwater levels.

The release also results in a one-to-one decrease in reservoir storage. In most modeled instances, the additional water released would be recovered in reservoir storage the following year by a reduction in releases that would otherwise be in excess of minimum Tuolumne or Merced river flow requirements. In a couple of instances, the modeled recoveries did not occur until one or more years later.

The modeled results indicate that release of Proposed Project water would only take place in water years where excess carry-over storage is present. Deliveries to surface water customers would not be diminished during these years, and no additional groundwater pumping would occur as a result. As such, the Proposed Project would not have a negative impact on groundwater supply.

Potential groundwater impacts for water resources projects typically could include changes to groundwater overdrafting, groundwater levels, groundwater quality, subsidence, subsurface drainage, and waterlogging. The Proposed Project would not result in these groundwater impacts because groundwater would not be pumped directly to account for Proposed Project water or indirectly to replace Project water.

Significance determinations for the impact analysis are based on the quantity of groundwater involved directly or indirectly and on the existing overdraft conditions in the basin. Within the San Joaquin River Region, approximately 2.6 million acre-feet of groundwater are extracted in a typical year (DWR 1998). The majority of the groundwater is pumped by a combination of private agricultural interests and municipalities. Because the supplemental releases would not result in increased groundwater pumping, many of the environmental impact and mitigation measures do not apply. The following sections are organized by river and by basin where the supplemental water would be released.

5.2.2.1 Proposed Action on the Tuolumne River

Modesto Groundwater Basin

No Action. The No Action Alternative represents existing conditions, including reliance on groundwater in portions of the Project Area. The No Action Alternative includes the VAMP 31-day pulse flows during April and May, flow releases in accordance with various operating plans, settlement agreements, and Federal Energy Regulatory Commission requirements now in place for the San Joaquin River Basin. Because No Action represents the baseline, no impacts are identified for its implementation.

Proposed Action. The maximum annual surface water release for the supplemental water for the VAMP flows from MID would be all or a portion of 47,000 acre-feet in conjunction with releases from TID. Of this volume, none of the water is projected to come from groundwater. The available water would come from carry-over storage from either New Don Pedro Reservoir or Lake McClure that would otherwise be released under discretionary operations of the two reservoirs. This would result in no impact on groundwater levels in the Modesto Groundwater Basin. This would also mean that there would be no impacts with respect to groundwater overdrafting, subsidence, water quality, or agricultural subsurface drainage.

Turlock Groundwater Basin

No Action. The No Action Alternative represents existing conditions as described above for the Modesto Groundwater Basin. Because No Action represents the baseline, no impacts are identified for its implementation.

Proposed Action. The maximum annual surface water release for the supplemental water for the VAMP flows from TID would be all or a portion of 47,000 acre-feet in conjunction with MID. Of this volume, none of this water is projected to come from groundwater because the supplemental water for the VAMP flows would take place following a combination of Wet or Above Normal years when there would be no demand for additional groundwater pumping. As such, the Proposed Action would have no impact on water levels within the Turlock Groundwater Basin. This would also mean that there would be no impacts with respect to groundwater overdrafting, subsidence, water quality or agricultural subsurface drainage.

5.2.2.2 Proposed Action on the Merced River

No Action. The No Action Alternative represents existing conditions, including reliance on groundwater in portions of the Project Area. The No Action Alternative includes the VAMP 31-day pulse flows during April and May, flow releases in accordance with various operating plans, settlement agreements, and Federal Energy Regulatory Commission requirements now in place for the San Joaquin River Basin. Because No Action represents the baseline, no impacts are identified for its implementation.

Proposed Action. The maximum annual surface water release for the supplemental water for the VAMP flows from Merced ID is 47,000 acre-feet. Of this volume, none of this water is projected to come from groundwater The available water would come from carry-over storage from either New Don Pedro Reservoir or Lake McClure that would otherwise be released under discretionary operations of the two reservoirs. As such, the Proposed Action would not have a negative impact on water levels, groundwater overdrafting, subsidence, water quality, or agricultural subsurface drainage within the Merced Groundwater Basin.

5.2.3 Impact Summary and Mitigation of Impacts

  • The following summarizes impacts of the Proposed Action in comparison to No Action by groundwater basin in the Project Area.

5.2.3.1 Modesto Groundwater Basin

  • The maximum surface water release for the supplemental water for the VAMP flows could come from MID (up to 47,000 acre-feet) in conjunction with water from TID. All of this water would come from carry-over storage in New Don Pedro Reservoir; none of the water would come from groundwater. As such, there would be no impacts to groundwater overdrafting, groundwater levels, water quality, subsidence, or agricultural subsurface drainage within the Modesto Groundwater Basin as a result of this action. Accordingly, no mitigation is necessary.

5.2.3.2 Turlock Groundwater Basin

  • The maximum surface water release for the supplemental water for the VAMP flows could come from TID (up to 47,000 acre-feet) in conjunction with water from MID. This water would come from carry-over storage in New Don Pedro Reservoir; none of the water would come from groundwater. As such, there would no impacts to groundwater overdrafting, groundwater levels, water quality, subsidence, or agricultural subsurface drainage within the Turlock Groundwater Basin as a result of this action. Accordingly, no mitigation is necessary.

5.2.3.3 Merced Groundwater Basin

  • The maximum surface water release for the supplemental water for the VAMP flows could come from Merced ID (up to 47,000 acre-feet). This water would come from carryover storage in Lake McClure. None of this water is expected to come from groundwater. As such, there would no impacts to groundwater overdrafting, groundwater levels, water quality, subsidence, or agricultural subsurface drainage within the Merced Groundwater Basin as a result of this action. Accordingly, no mitigation is necessary.
Draft SES/EIR
CH5

December 20, 2000

 


Dennis W. Westcot, Project Administrator
San Joaquin River Group
716 Valencia Ave.
Davis, CA 95616-0153
(530) 758-8633
westcot-sjrga@sbcglobal.net

For information regarding this web site, contact the Modesto Irrigation District.